From ee071564ef898864e2549fd6c57c3d15950049fb Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Tomasz=20D=C5=82uski?= Date: Wed, 2 Nov 2022 17:26:52 +0100 Subject: [PATCH] feature: dont use wait-for-it which is newline characted dependant and causes problem on windows closes #17 --- docker-compose.yml | 16 +++- mlflow/Dockerfile | 3 - mlflow/wait-for-it.sh | 182 ------------------------------------------ 3 files changed, 12 insertions(+), 189 deletions(-) delete mode 100644 mlflow/wait-for-it.sh diff --git a/docker-compose.yml b/docker-compose.yml index 8cf41a5..f71df60 100644 --- a/docker-compose.yml +++ b/docker-compose.yml @@ -47,21 +47,29 @@ services: networks: - public - internal - entrypoint: bash ./wait-for-it.sh db:3306 -t 90 -- mlflow server --backend-store-uri mysql+pymysql://${MYSQL_USER}:${MYSQL_PASSWORD}@db:3306/${MYSQL_DATABASE} --default-artifact-root s3://${AWS_BUCKET_NAME}/ --artifacts-destination s3://${AWS_BUCKET_NAME}/ -h 0.0.0.0 + entrypoint: mlflow server --backend-store-uri mysql+pymysql://${MYSQL_USER}:${MYSQL_PASSWORD}@db:3306/${MYSQL_DATABASE} --default-artifact-root s3://${AWS_BUCKET_NAME}/ --artifacts-destination s3://${AWS_BUCKET_NAME}/ -h 0.0.0.0 + depends_on: + wait-for-db: + condition: service_completed_successfully create_s3_buckets: image: minio/mc depends_on: - "s3" - environment: - - MLFLOW_S3_ENDPOINT_URL=http://s3:9000 entrypoint: > /bin/sh -c " - until (/usr/bin/mc alias set minio ${MLFLOW_S3_ENDPOINT_URL} '${AWS_ACCESS_KEY_ID}' '${AWS_SECRET_ACCESS_KEY}') do echo '...waiting...' && sleep 1; done; + until (/usr/bin/mc alias set minio http://s3:9000 '${AWS_ACCESS_KEY_ID}' '${AWS_SECRET_ACCESS_KEY}') do echo '...waiting...' && sleep 1; done; /usr/bin/mc mb minio/${AWS_BUCKET_NAME}; exit 0; " networks: - internal + wait-for-db: + image: atkrad/wait4x + depends_on: + - db + command: tcp db:3306 -t 90s -i 250ms + networks: + - internal networks: internal: public: diff --git a/mlflow/Dockerfile b/mlflow/Dockerfile index 6205043..f75ec2a 100644 --- a/mlflow/Dockerfile +++ b/mlflow/Dockerfile @@ -5,6 +5,3 @@ RUN pip install mlflow boto3 pymysql ADD . /app WORKDIR /app -COPY wait-for-it.sh wait-for-it.sh -RUN chmod +x wait-for-it.sh - diff --git a/mlflow/wait-for-it.sh b/mlflow/wait-for-it.sh deleted file mode 100644 index d990e0d..0000000 --- a/mlflow/wait-for-it.sh +++ /dev/null @@ -1,182 +0,0 @@ -#!/usr/bin/env bash -# Use this script to test if a given TCP host/port are available - -WAITFORIT_cmdname=${0##*/} - -echoerr() { if [[ $WAITFORIT_QUIET -ne 1 ]]; then echo "$@" 1>&2; fi } - -usage() -{ - cat << USAGE >&2 -Usage: - $WAITFORIT_cmdname host:port [-s] [-t timeout] [-- command args] - -h HOST | --host=HOST Host or IP under test - -p PORT | --port=PORT TCP port under test - Alternatively, you specify the host and port as host:port - -s | --strict Only execute subcommand if the test succeeds - -q | --quiet Don't output any status messages - -t TIMEOUT | --timeout=TIMEOUT - Timeout in seconds, zero for no timeout - -- COMMAND ARGS Execute command with args after the test finishes -USAGE - exit 1 -} - -wait_for() -{ - if [[ $WAITFORIT_TIMEOUT -gt 0 ]]; then - echoerr "$WAITFORIT_cmdname: waiting $WAITFORIT_TIMEOUT seconds for $WAITFORIT_HOST:$WAITFORIT_PORT" - else - echoerr "$WAITFORIT_cmdname: waiting for $WAITFORIT_HOST:$WAITFORIT_PORT without a timeout" - fi - WAITFORIT_start_ts=$(date +%s) - while : - do - if [[ $WAITFORIT_ISBUSY -eq 1 ]]; then - nc -z $WAITFORIT_HOST $WAITFORIT_PORT - WAITFORIT_result=$? - else - (echo -n > /dev/tcp/$WAITFORIT_HOST/$WAITFORIT_PORT) >/dev/null 2>&1 - WAITFORIT_result=$? - fi - if [[ $WAITFORIT_result -eq 0 ]]; then - WAITFORIT_end_ts=$(date +%s) - echoerr "$WAITFORIT_cmdname: $WAITFORIT_HOST:$WAITFORIT_PORT is available after $((WAITFORIT_end_ts - WAITFORIT_start_ts)) seconds" - break - fi - sleep 1 - done - return $WAITFORIT_result -} - -wait_for_wrapper() -{ - # In order to support SIGINT during timeout: http://unix.stackexchange.com/a/57692 - if [[ $WAITFORIT_QUIET -eq 1 ]]; then - timeout $WAITFORIT_BUSYTIMEFLAG $WAITFORIT_TIMEOUT $0 --quiet --child --host=$WAITFORIT_HOST --port=$WAITFORIT_PORT --timeout=$WAITFORIT_TIMEOUT & - else - timeout $WAITFORIT_BUSYTIMEFLAG $WAITFORIT_TIMEOUT $0 --child --host=$WAITFORIT_HOST --port=$WAITFORIT_PORT --timeout=$WAITFORIT_TIMEOUT & - fi - WAITFORIT_PID=$! - trap "kill -INT -$WAITFORIT_PID" INT - wait $WAITFORIT_PID - WAITFORIT_RESULT=$? - if [[ $WAITFORIT_RESULT -ne 0 ]]; then - echoerr "$WAITFORIT_cmdname: timeout occurred after waiting $WAITFORIT_TIMEOUT seconds for $WAITFORIT_HOST:$WAITFORIT_PORT" - fi - return $WAITFORIT_RESULT -} - -# process arguments -while [[ $# -gt 0 ]] -do - case "$1" in - *:* ) - WAITFORIT_hostport=(${1//:/ }) - WAITFORIT_HOST=${WAITFORIT_hostport[0]} - WAITFORIT_PORT=${WAITFORIT_hostport[1]} - shift 1 - ;; - --child) - WAITFORIT_CHILD=1 - shift 1 - ;; - -q | --quiet) - WAITFORIT_QUIET=1 - shift 1 - ;; - -s | --strict) - WAITFORIT_STRICT=1 - shift 1 - ;; - -h) - WAITFORIT_HOST="$2" - if [[ $WAITFORIT_HOST == "" ]]; then break; fi - shift 2 - ;; - --host=*) - WAITFORIT_HOST="${1#*=}" - shift 1 - ;; - -p) - WAITFORIT_PORT="$2" - if [[ $WAITFORIT_PORT == "" ]]; then break; fi - shift 2 - ;; - --port=*) - WAITFORIT_PORT="${1#*=}" - shift 1 - ;; - -t) - WAITFORIT_TIMEOUT="$2" - if [[ $WAITFORIT_TIMEOUT == "" ]]; then break; fi - shift 2 - ;; - --timeout=*) - WAITFORIT_TIMEOUT="${1#*=}" - shift 1 - ;; - --) - shift - WAITFORIT_CLI=("$@") - break - ;; - --help) - usage - ;; - *) - echoerr "Unknown argument: $1" - usage - ;; - esac -done - -if [[ "$WAITFORIT_HOST" == "" || "$WAITFORIT_PORT" == "" ]]; then - echoerr "Error: you need to provide a host and port to test." - usage -fi - -WAITFORIT_TIMEOUT=${WAITFORIT_TIMEOUT:-15} -WAITFORIT_STRICT=${WAITFORIT_STRICT:-0} -WAITFORIT_CHILD=${WAITFORIT_CHILD:-0} -WAITFORIT_QUIET=${WAITFORIT_QUIET:-0} - -# Check to see if timeout is from busybox? -WAITFORIT_TIMEOUT_PATH=$(type -p timeout) -WAITFORIT_TIMEOUT_PATH=$(realpath $WAITFORIT_TIMEOUT_PATH 2>/dev/null || readlink -f $WAITFORIT_TIMEOUT_PATH) - -WAITFORIT_BUSYTIMEFLAG="" -if [[ $WAITFORIT_TIMEOUT_PATH =~ "busybox" ]]; then - WAITFORIT_ISBUSY=1 - # Check if busybox timeout uses -t flag - # (recent Alpine versions don't support -t anymore) - if timeout &>/dev/stdout | grep -q -e '-t '; then - WAITFORIT_BUSYTIMEFLAG="-t" - fi -else - WAITFORIT_ISBUSY=0 -fi - -if [[ $WAITFORIT_CHILD -gt 0 ]]; then - wait_for - WAITFORIT_RESULT=$? - exit $WAITFORIT_RESULT -else - if [[ $WAITFORIT_TIMEOUT -gt 0 ]]; then - wait_for_wrapper - WAITFORIT_RESULT=$? - else - wait_for - WAITFORIT_RESULT=$? - fi -fi - -if [[ $WAITFORIT_CLI != "" ]]; then - if [[ $WAITFORIT_RESULT -ne 0 && $WAITFORIT_STRICT -eq 1 ]]; then - echoerr "$WAITFORIT_cmdname: strict mode, refusing to execute subprocess" - exit $WAITFORIT_RESULT - fi - exec "${WAITFORIT_CLI[@]}" -else - exit $WAITFORIT_RESULT -fi